FastQCFastQC Report
Wed 31 May 2023
EGAF00007953482

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953482
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22287343
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG551750.2475620355463637No Hit
CAATCAGACTATTGCG358590.1608940105601641No Hit
CTCTGCAACCCTCCTA299640.1344440205366786No Hit
TGGGAGTGAGCGCAAA290070.13015010358121198No Hit
CATTGCGCTCGTGCAC279020.12519213259292505No Hit
CCGTTCTGAAATGCTC257870.11570244151579666No Hit
TGGCTAATGCTTGTGA247880.11122007679425941No Hit
GAGAGAAGACCAGAGA241080.10816901772454438No Hit
GGGAGCTCTAGTGGTG237120.10639222450159268No Hit
ATCCCGACTCGTTCTC236090.10593007878956232No Hit
CCTAACGCTTCGTCCT224670.10080609429307028No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)