FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16443430
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG1369620.8329284097052744No Hit
TTCCTCGGAGAGAGGG244540.14871593092195484No Hit
CGTGCCAGAGCACTTA193340.11757887496708411No Hit
CGATGATTGTGTCACA192170.11686734458686539No Hit
TGTGCAATGGAACCTT181800.11056087446475583No Hit
TTGCATTACTACAGCT168660.10256984096383784No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)