FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953498

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953498
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16240235
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG1318340.811773967556504No Hit
TTCCTCGGAGAGAGGG242760.14948059557019958No Hit
CGTGCCAGAGCACTTA193220.11897611087524289No Hit
CGATGATTGTGTCACA191630.11799706100311973No Hit
TGTGCAATGGAACCTT180500.11114371189825763No Hit
TTGCATTACTACAGCT163230.10050962932494512No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)