FastQCFastQC Report
Wed 31 May 2023
EGAF00007953502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16274478
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG1341570.8243398037098332No Hit
TTCCTCGGAGAGAGGG244810.15042571565121782No Hit
CGTGCCAGAGCACTTA195140.11990553552623931No Hit
CGATGATTGTGTCACA190390.11698685512370964No Hit
TGTGCAATGGAACCTT180300.11078696348970456No Hit
TTGCATTACTACAGCT165690.10180971703055545No Hit
ATTTAGCCTCCTAGCG164010.10077742585660812No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)