FastQCFastQC Report
Wed 31 May 2023
EGAF00007953542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29571424
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG2337300.7903914265339403No Hit
CTCTCTTTGATGAATG606030.20493771284061263No Hit
TTTAGTCTGAACGTTC516980.17482418161533242No Hit
TATAGCCGAATAACCC502960.17008311808048202No Hit
ATCCCGACTACCGTTA476230.1610439862483457No Hit
AAACGCTACCGGTTGC439480.14861644809529634No Hit
GTAATCTCTTTGTTTC425730.14396668892238668No Hit
ATTGTGCGACGTAGAG417940.1413323889982437No Hit
ATTGAGAGATGTCACA399780.13519132524696817No Hit
GGAACATCTTCTGGGC367520.12428214481656344No Hit
CTAAGTCGACCTAACA350110.11839470429290115No Hit
ACACACTGATTAGAAG343470.11614929331776516No Hit
GTTCTCGACTTGGCGC342590.11585170873069893No Hit
TCGGGTGACAACGTTC342090.11568262657895675No Hit
GAACGCGCTAGTAGGC339940.11495557332646543No Hit
AGTACAAGACCGTTAA320060.10823286697319683No Hit
GCAGTATTGTTGACAC319440.10802320510503653No Hit
AAGACAAACGTCAATC306200.10354590972690393No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)