FastQCFastQC Report
Wed 31 May 2023
EGAF00007953546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30027015
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG2853270.9502343140002428No Hit
CTCTCTTTGATGAATG605280.20157847858003866No Hit
TTTAGTCTGAACGTTC524320.17461609154289898No Hit
TATAGCCGAATAACCC505530.1683583932668632No Hit
ATCCCGACTACCGTTA476170.15858053156465934No Hit
AAACGCTACCGGTTGC447740.14911239095860845No Hit
GTAATCTCTTTGTTTC438930.14617836638107384No Hit
ATTGTGCGACGTAGAG421600.14040689692265448No Hit
ATTGAGAGATGTCACA399110.13291697493074153No Hit
GGAACATCTTCTGGGC372260.12397502715471384No Hit
CTAAGTCGACCTAACA353090.11759077617272314No Hit
GAACGCGCTAGTAGGC351230.1169713339804173No Hit
ACACACTGATTAGAAG347760.11581570795498654No Hit
TCGGGTGACAACGTTC345810.11516629275337559No Hit
GTTCTCGACTTGGCGC342550.11408060374965678No Hit
AGTACAAGACCGTTAA331830.11051048530798016No Hit
GCAGTATTGTTGACAC330820.11017412153688935No Hit
AAGACAAACGTCAATC312100.10393973560142425No Hit
AGCCCAGTGCGACACC304460.10139536014485623No Hit
ACACTCCACTTAGCTG301810.10051282153753878No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)