FastQCFastQC Report
Wed 31 May 2023
EGAF00007953550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29539694
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG2387120.808105865957853No Hit
CTCTCTTTGATGAATG608150.20587552464152137No Hit
TTTAGTCTGAACGTTC519800.17596661630956636No Hit
TATAGCCGAATAACCC498260.16867473305579944No Hit
ATCCCGACTACCGTTA473800.16039434937951624No Hit
AAACGCTACCGGTTGC442930.1499440041592848No Hit
GTAATCTCTTTGTTTC425890.1441754948443271No Hit
ATTGTGCGACGTAGAG420910.14248962768537818No Hit
ATTGAGAGATGTCACA398110.13477119972874466No Hit
GGAACATCTTCTGGGC364330.12333573936141654No Hit
CTAAGTCGACCTAACA353220.11957469837026748No Hit
TCGGGTGACAACGTTC344970.11678184614911719No Hit
ACACACTGATTAGAAG343980.11644670388257915No Hit
GAACGCGCTAGTAGGC342530.11595583894674062No Hit
GTTCTCGACTTGGCGC340510.11527201331198625No Hit
AGTACAAGACCGTTAA319610.10819678768507217No Hit
GCAGTATTGTTGACAC316420.10711688482622737No Hit
AAGACAAACGTCAATC311510.10545471459521552No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)