FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26216563
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG2472690.943178554717489No Hit
CAACGCGTGCGAGGTA301370.11495404641714477No Hit
TTAGACCGAAAACATG293670.1120169718662206No Hit
AAAGATCGATGTTGTG282130.10761517442236804No Hit
TTGTAACCTGGAGTCA274730.1047925313474539No Hit
CGTAATCGAAAGACAT269470.10278616613474466No Hit

[OK]Adapter Content

Adapter graph