FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953558

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953558
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25408635
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG2091790.8232594942624819No Hit
CAACGCGTGCGAGGTA292920.1152836427458618No Hit
TTAGACCGAAAACATG286450.11273726431978734No Hit
AAAGATCGATGTTGTG277150.10907709131167415No Hit
TTGTAACCTGGAGTCA266790.1049997372940341No Hit
CGTAATCGAAAGACAT263510.1037088375664415No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)