FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953562

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953562
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25823942
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG2498170.9673852272437725No Hit
CAACGCGTGCGAGGTA295200.11431252440080603No Hit
TTAGACCGAAAACATG284280.11008389036809331No Hit
AAAGATCGATGTTGTG277350.1074003341550256No Hit
TTGTAACCTGGAGTCA272470.10551061491696348No Hit
CGTAATCGAAAGACAT262470.1016382394291313No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)