FastQCFastQC Report
Wed 31 May 2023
EGAF00007953586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32612966
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG3231370.990823711035666No Hit
TTTACGTACCGAATCT532180.16318049698392964No Hit
TGTGACTGAATGTCCA530390.16263163552802895No Hit
TGCTTGCACAATCGAA489370.1500538160190643No Hit
TGGAGTTACAAGTTCC481760.14772038826520714No Hit
CTGATTACTTAGCTTG449210.13773969531014138No Hit
TCCGACACTCTGTGCG353950.10853045380785054No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)