FastQCFastQC Report
Wed 31 May 2023
EGAF00007953590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31594029
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG2414590.7642551698613684No Hit
TTTACGTACCGAATCT522310.1653192126904739No Hit
TGTGACTGAATGTCCA514620.16288520846771395No Hit
TGCTTGCACAATCGAA480660.15213634196512257No Hit
TGGAGTTACAAGTTCC470660.14897118692902384No Hit
CTGATTACTTAGCTTG440300.13936177623942803No Hit
TCCGACACTCTGTGCG341710.10815651273853044No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)