FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32229084
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG3192530.99057422792407No Hit
TGTGACTGAATGTCCA528490.1639792182737803No Hit
TTTACGTACCGAATCT527460.1636596311579938No Hit
TGCTTGCACAATCGAA490070.1520583085761916No Hit
TGGAGTTACAAGTTCC476700.14790988164603128No Hit
CTGATTACTTAGCTTG448960.13930274903251982No Hit
TCCGACACTCTGTGCG345210.10711132838897934No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)