FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953598

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953598
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31304598
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG2693140.8603017358664052No Hit
TGTGACTGAATGTCCA521060.16644839202215597No Hit
TTTACGTACCGAATCT516960.16513868026671352No Hit
TGCTTGCACAATCGAA477970.15268364091434747No Hit
TGGAGTTACAAGTTCC475140.15177962036120063No Hit
CTGATTACTTAGCTTG440470.1407045699804227No Hit
TCCGACACTCTGTGCG337890.10793622074303588No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)