FastQCFastQC Report
Wed 31 May 2023
EGAF00007953600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40318754
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACATTCCG1019095125.275957188557964No Hit
GACACAAT989555924.54331550027563No Hit
TGTGATGC984596124.42030078608084No Hit
CTGCGGTA968000124.00868092302654No Hit
GACACAAA510870.1267077846701314No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)