FastQCFastQC Report
Wed 31 May 2023
EGAF00007953610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39879024
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG4050161.0156116157707369No Hit
TCCTTAATGTCGGGCT1502110.37666669073947245No Hit
TCAATGGACGCTTCGG1500720.3763181365722491No Hit
AGGAACCGACCCGCAA1242290.31151464489201136No Hit
GTTAATCCTTCGTACA1174120.2944204451944461No Hit
TCTAGTGGAATCAGGG1156640.2900371884728172No Hit
ACCTACCTGCACAGTT1084030.2718296215072866No Hit
GGACCTCGAGGTGCAA1083320.27165158304776965No Hit
TTCCGTCGATAGGAGC961920.24120951405430585No Hit
ATCGTTTACATGAATG932120.2337369139224671No Hit
TACCTTCCTCCCGAGT921690.23112150387632355No Hit
GTTGATGACATCCTCC902090.22620663936008062No Hit
TAAGCTGACTACACTG889610.22307717460688103No Hit
TGGTCCTTGTACGATC877330.21999786153241865No Hit
TGTTGTACTCGGCACT822660.2062889001496125No Hit
TCCTTCACTAACGCAG765840.19204080822038172No Hit
CTGTTGCTGCGGAATG756420.1896786641518609No Hit
CACAGCTCTATCCTAG737910.18503712628473556No Hit
ACGTCCACTTTCCATT703370.17637593136682583No Hit
CCTTCAGTGCCCGCAA630330.15806053829201036No Hit
CTGGCCAGAACAACAA625100.1567490718930333No Hit
TAAGGGCGAAGGACCA616390.1545649662840294No Hit
CACTATACTCCATGTA604370.15155085039192534No Hit
TTTCGGCTGTGGTCCG600710.1506330746710351No Hit
TACTGTTTGAAAGTAC597370.1497955416361243No Hit
CTCGGTTTGCCAGCAC585440.14680399399945196No Hit
TAACTCACTTGAGGCA581240.14575080874597132No Hit
TCGCGGTGAACCGTGC546760.13710465933168275No Hit
CCAGCACGAACAGGCA528480.13252079589510515No Hit
CGGTTCACTTGACTCA524540.13153280782398286No Hit
TACCTTCCTCATTCAG523410.13124945083911782No Hit
AGTTTGCGACCTACGG520430.13050219082593395No Hit
GGGTTCTCTCGGAAGT516410.12949414208331678No Hit
GCTACTGCTTCGACAT497280.1246971340121062No Hit
GATACCATGGCTCTTC492380.12346841788304548No Hit
TCGGACCGAGGCCTGT488600.12252055115491292No Hit
TAAGGCTTGTTCGTTT468890.11757810321536455No Hit
CGCATCTTGGGATGGT468680.11752544395269053No Hit
CGCTTCCCTCATCCTC464120.11638198567748298No Hit
TCCGACACTACGCCAC453260.1136587495220545No Hit
TAATGGGCTATCACAC446910.11206643372214926No Hit
GCTTCTGTGCCAGGCT435190.10912754534815096No Hit
ATGGCCGTGTAATAGG434260.1088943400420231No Hit
GGGTAGAACCCATGTA434050.10884168077934905No Hit
CGAGAGATGGTTTACG423400.10617110388659462No Hit
GCAGTCGACTCCGTAA404840.101517028099785No Hit
GAAGAATACGGACACA402760.10099545064091839No Hit
TACGTTTACCGAGGTA400530.10043625942299891No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)