FastQCFastQC Report
Wed 31 May 2023
EGAF00007953632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37255899
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCATTTG991296926.607783642531345No Hit
TGATGGCT941987425.284248274347103No Hit
CAGCCCGA893883123.99306214567524No Hit
ATTGAAAC841841322.596188056017652No Hit
GCCATTTA522280.14018719559015339No Hit
CAGCCCAA390000.10468140897633418No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)