FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37113921
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCATTTG988317126.62928285049699No Hit
TGATGGCT937545925.261300200536613No Hit
CAGCCCGA888139423.930088119765088No Hit
ATTGAAAC840272222.64035104240266No Hit
GCCATTTA518850.1397992952563541No Hit
CAGCCCAA384790.10367807809905077No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)