FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953642

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953642
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37113921
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG3410730.9189894002307113No Hit
GTGCTAATGACCGTTA724400.19518282641168527No Hit
AGTGTTCGAGGGTTCC578970.15599806875700362No Hit
TCGCCGAGAAAGTAAC506340.13642859238720695No Hit
TCGGGTCGAGCCCTGA483950.13039581562939684No Hit
CACGGAAGACTCGAGC448980.12097347515505032No Hit
AGAGTAATGCGCACTG437840.11797190601337973No Hit
CACTCTGACCGCAACC378950.10210454454542812No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)