FastQCFastQC Report
Wed 31 May 2023
EGAF00007953644

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953644
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36383072
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCATTTG968081926.60803078970352No Hit
TGATGGCT915466325.161874731193674No Hit
CAGCCCGA866321023.81110094276811No Hit
ATTGAAAC827138422.734155048809512No Hit
GCCATTTA515140.14158782413975377No Hit
CAGCCCAA380680.10463107678208151No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)