FastQCFastQC Report
Wed 31 May 2023
EGAF00007953650

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953650
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34873774
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG3099740.8888455835035234No Hit
AAATAGCGAAGTAGGC488680.14012822357568755No Hit
TGTGACTGAGACATAA461790.13241755824878604No Hit
GGGTGTGCTGAGTAAT457520.13119314244566704No Hit
CAATTCGGAGTGGTGA454930.13045046400770963No Hit
TTGGTATCTCAGCTGC400810.11493163888714769No Hit
AATGTGCTGCAGGCCT377050.10811849615129122No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)