FastQCFastQC Report
Wed 31 May 2023
EGAF00007953654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34014822
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG2839160.8346831860534211No Hit
AAATAGCGAAGTAGGC477700.14043877695435245No Hit
TGTGACTGAGACATAA461020.1355350323456051No Hit
CAATTCGGAGTGGTGA452820.1331243185691226No Hit
GGGTGTGCTGAGTAAT448430.13183370473024966No Hit
TTGGTATCTCAGCTGC400260.11767223124083966No Hit
AATGTGCTGCAGGCCT373190.10971393588359804No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)