FastQCFastQC Report
Wed 31 May 2023
EGAF00007953658

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953658
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34744460
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG3125140.8994642599136669No Hit
AAATAGCGAAGTAGGC494120.14221547838130166No Hit
TGTGACTGAGACATAA464920.13381126084561396No Hit
GGGTGTGCTGAGTAAT457610.13170732830500173No Hit
CAATTCGGAGTGGTGA454480.13080646526093656No Hit
TTGGTATCTCAGCTGC401240.11548315904175803No Hit
AATGTGCTGCAGGCCT378570.10895837782483883No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)