FastQCFastQC Report
Wed 31 May 2023
EGAF00007953660

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953660
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34033744
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGTACC951304827.95181159028522No Hit
GTTCACAA881998025.915397377379346No Hit
CCATGTGT879860425.852589124487746No Hit
AAGACGTG636367718.69813970511149No Hit
TGCGTACA461900.13571824481020953No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)