FastQCFastQC Report
Wed 31 May 2023
EGAF00007953662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34033744
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG3031030.8905955219032029No Hit
AAATAGCGAAGTAGGC484920.1424821200982178No Hit
TGTGACTGAGACATAA465870.13688473416265928No Hit
CAATTCGGAGTGGTGA454720.1336085738906657No Hit
GGGTGTGCTGAGTAAT444140.1304998944576888No Hit
TTGGTATCTCAGCTGC398650.11713374820002173No Hit
AATGTGCTGCAGGCCT376420.11060199547836994No Hit

[OK]Adapter Content

Adapter graph