FastQCFastQC Report
Wed 31 May 2023
EGAF00007953666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953666
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24373513
Sequences flagged as poor quality0
Sequence length24
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGG2083700.8549034355449705No Hit
GCTAGCGACAGTCGGAGTGTAGAT289620.11882571051616564No Hit
AGAACAATGTTGTTTCGTGTAGAT272540.1118181035290235No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)