FastQCFastQC Report
Thu 1 Jun 2023
EGAF00007953690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007953690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56610116
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG5128850.9059953171620422No Hit
TGTGACTGAATGTCCA902240.15937787514867485No Hit
TTTACGTACCGAATCT902230.15937610867993982No Hit
TGCTTGCACAATCGAA845640.1493796621084472No Hit
TGGAGTTACAAGTTCC823230.14542100567326166No Hit
CTGATTACTTAGCTTG771410.13626716468837477No Hit
TCCGACACTCTGTGCG596880.10543698585602616No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)