FastQCFastQC Report
Tue 4 Apr 2023
EGAF00007958290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56719244
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGCTTCAATCGGGAGTACTACTCGATTGTCAACGTCAAGGAGTCGCA776140.1368389183748641No Hit
GGCCAATTGATTTGATGGTAAGGGAGGGATCGTTGACCTCGTCTGTTATG634200.11181390217401346No Hit
GTTTGGTTTAGACGTCCGGGAATTGCATCTGTTTTTAAGCCTAATGTGGG616460.10868621591641806No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)