FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007958441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463560
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG25960.5600138061955302No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC11930.2573561135559582No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT7650.16502718094745017No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT7040.15186815083268618No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6230.13439468461472087No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)