FastQCFastQC Report
Sun 21 May 2023
EGAF00007958451

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958451
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472645
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22150.4686392535623988No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG10460.22130774682901544No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC7690.16270139322324365No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG4840.10240243734726909No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC4840.10240243734726909No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)