FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007958489

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958489
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences481549
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG25050.5201962832442804No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13620.2828372605903034No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5700.11836801654660273No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)