FastQCFastQC Report
Wed 31 May 2023
EGAF00007958493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences404313
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT50291.2438383133859163No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG33910.8387066455938839No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11510.2846804332287114No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7020.17362785762515676No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG5020.12416123152112349No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4640.11476257256135716No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4490.11105257560355467No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4140.10239591603534885No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)