FastQCFastQC Report
Wed 31 May 2023
EGAF00007958513

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958513
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences468096
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64881.3860404703308724No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC12950.2766526524473612No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG12690.2710982362592289No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG12070.2578530899644517No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10220.21833128247197153No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8770.18735473065354116No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC7350.15701907301066448No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5840.1247607328411266No Hit
CCGTCTGGTGAAGCACTGCGTAGCGATAAAC5670.12112899917965546No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5600.11963357943669674No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5060.10809748427672956No Hit
GTGGGCGGCTCTGATGCACAGAACACCTCTA5020.10724295870932457No Hit
GCGGAAGTGAATGTTGACCAGGCTCACCTGG4900.10467938200710966No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)