FastQCFastQC Report
Tue 8 Aug 2023
EGAF00007958610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114693348
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN8631500.7525719800245084No Hit
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA1244390.10849713795084263No Hit
GTCAAAATTCTCCTGCACCGGAGGATTGGGGCACTTCCCAAGATGAAATG1157060.10088292130071921No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)