FastQCFastQC Report
Tue 8 Aug 2023
EGAF00007958682

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958682
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106207787
Sequences flagged as poor quality0
Sequence length35-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN85707758.06981789386121No Hit
GTTGGTTAGTAGGCCTAGTATGAGGAGCGTTATGGAGTGGAAGTGAAATC4652190.4380272041634763No Hit
GGGGGCTTCAATCGGGAGTACTACTCGATTGTCAACGTCAAGGAGTCGCA3680430.34653108815834754No Hit
GGGGGAAGTATGTAGGAGTTGAAGATTAGTCCGCCGTAGTCGGTGTACTC3090410.29097772275398226No Hit
GGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTTTGGTTCTCAGGGT2775580.2613348868666287No Hit
GGGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTTTGGTTCTCAGGG2767090.26053551045179013No Hit
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG2603250.2451091462813362No Hit
GGCCAATTGATTTGATGGTAAGGGAGGGATCGTTGACCTCGTCTGTTATG2317380.2181930407795805No Hit
GTTGGTATAGAATGGGGTCTCCTCCTCCGGCGGGGTCGAAGAAGGTGGTG2209230.20801017160822682No Hit
CTCGTGTTACATCGCGCCATCATTGGTATATGGTTAGTGTGTTGGTTAGT2060120.19397071139425964No Hit
GGGGGCTAGTTTTTGTCATGTGAGAAGAAGCAGGCCGGATGTCAGAGGGG2015260.18974691563811605No Hit
GTGGGCGATTGATGAAAAGGCGGTTGAGGCGTCTGGTGAGTAGTGCATGG2003340.18862458738548052No Hit
GGGCGATTGATGAAAAGGCGGTTGAGGCGTCTGGTGAGTAGTGCATGGCT2003330.188623645834933No Hit
GGGTGGTTGGTGTAAATGAGTGAGGCAGGAGTCCGAGGAGGTTAGTTGTG1948470.18345829953127635No Hit
GTGGGAAGAAAGTTAGATTTACGCCGATGAATATGATAGTGAAATGGATT1899780.1788738899154353No Hit
CTCAGGGTTTGTTATAATTTTTTATTTTTATGGGCTTTGGTGAGGGGGGT1894030.1783324983506153No Hit
GGGGGTCTTAGCTTTGGCTCTCCTTGCAAAGTTATTTCTAGTTAATTCAT1839090.17315961964257856No Hit
GGTTGGTGTAAATGAGTGAGGCAGGAGTCCGAGGAGGTTAGTTGTGGCAA1815050.17089613212635718No Hit
GTCGTTACCTAGAAGGTTGCCTGGCTGGCCCAGCTCGGCTCGAATAAGGA1790860.1686185213519231No Hit
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA1779050.16750655015531016No Hit
GGTGTGTGGTGGCCTTGGTATGTGCTTTCTCGTGTTACATCGCGCCATCA1777530.16736343447208818No Hit
GGGACGATTAGTTTTAGCATTGGAGTAGGTTTAGGTTATGTACGTAGTCT1777120.16732483089964015No Hit
GGGAGGGCGATGAGGACTAGGATGATGGCGGGCAGGATAGTTCAGACGGT1562460.1471135068467249No Hit
GTGGGGATCAATAGAGGGGGAAATAGAATGATCAGTACTGCGGCGGGTAG1504900.14169394189523976No Hit
GTGGGCTACAACGTAGTACGTGTCGTGTAGTACGATGTCTAGTGATGAGT1450440.13656625761348365No Hit
GTAGGGATGGGAGGGCGATGAGGACTAGGATGATGGCGGGCAGGATAGTT1338220.12600017736929214No Hit
GTTGTTTTCTATTAGACTATGGTGAGCTCAGGTGATTGATACTCCTGATG1331490.12536651385081585No Hit
GTCGGTTGTTGATGAGATATTTGGAGGTGGGGATCAATAGAGGGGGAAAT1289470.121410118450166No Hit
GGGGGGTAAGGCGAGGTTAGCGAGGCTTGCTAGAAGTCATCAAAAAGCTA1276610.1201992844460642No Hit
GTCCGGAGAGTATATTGTTGAAGAGGATAGCTATTAGAAGGATTATGGAT1276290.12016915482854379No Hit
CTCGAGTGATGTGGGCGATTGATGAAAAGGCGGTTGAGGCGTCTGGTGAG1217390.11462342210369189No Hit
GGACAGGTGGTGTGTGGTGGCCTTGGTATGTGCTTTCTCGTGTTACATCG1178600.11097114752988875No Hit
GTGGAAGTGAAATCACATGGCTAGGCCGGAGGTCATTAGGAGGGCTGAGA1176800.11080166843133639No Hit
GGGGTGTAGGTGTGCCTTGTGGTAAGAAGTGGGCTAGGGCATTTTTAATC1172650.11041092495411849No Hit
CTCCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGG1160780.10929330445422047No Hit
GGGTATTACTATGAAGAAGATTATTACAAATGCATGGGCTGTGACGATAA1136860.10704111554456924No Hit
GTGGTGATTAGTCGGTTGTTGATGAGATATTTGGAGGTGGGGATCAATAG1128280.10623326517480305No Hit
CTCAGGAGTTTGATAGTTCTTGGGCAGTGAGAGTGAGTAGTAGAATGTTT1098110.10339260717295616No Hit
GGTTGCTTGCGTGAGGAAATACTTGATGGCAGCTTCTGTGGAACGAGGGT1094320.1030357595154487No Hit
GGGGAAGTATGTAGGAGTTGAAGATTAGTCCGCCGTAGTCGGTGTACTCG1066900.10045402791416791No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)