FastQCFastQC Report
Tue 8 Aug 2023
EGAF00007958683

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958683
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences106207787
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15348741.4451614550635539No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC6121150.5763372133909541No Hit
CGCAAAACTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT5842920.5501404525074983No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG5147640.48467632604001065No Hit
CTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACT5094600.47968234193600134No Hit
AATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGG4037970.3801952864341293No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGG3634110.3421698260222671No Hit
CATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCT3177260.29915508925913314No Hit
GTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAAT2872390.27045003771710263No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGC2839940.2673947061904227No Hit
CTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACTATTCCTC2382950.22436678771962362No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA2258800.212677437672249No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA2135670.20108412578072077No Hit
GTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGA2057530.19372684980245375No Hit
GCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTC2032020.19132495435574795No Hit
CCAAAATGAACGAAAATCTGTTCGCTTCATTCATTGCCCCCACAATCCTA2011140.18935899681254068No Hit
TGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCT1930570.181772924051228No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG1820530.17141210182639435No Hit
ACTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACAC1805940.17003837957757278No Hit
AGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCT1686270.15877084417548404No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGG1646610.15503665470404726No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGG1578830.14865482509300376No Hit
CAATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGG1556190.1465231546534342No Hit
CTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAG1528540.1439197673895606No Hit
CGGTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCG1522870.1433859082291207No Hit
CACTACTATAACCACCCTAACCCTGACTTCCCTAATTCCCCCCATCCTTA1512940.14245094853544024No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC1460490.13751251591373426No Hit
CCCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAG1455680.1370596301003805No Hit
GTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCAT1374820.12944625237318994No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGG1331770.12539287726614623No Hit
ATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCG1266780.11927374025785886No Hit
CATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCT1229760.11578812013096552No Hit
CAACCCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCT1191580.1121932801405607No Hit
CCCTAATAAAATTAATTAACCACTCATTCATCGACCTCCCCACCCCATCC1178260.11093913481127331No Hit
CGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACC1177090.11082897339721427No Hit
CCCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCACAGCAGTC1146840.10798078299098728No Hit
CCATAATTACCCCCATACTCCTTACACTATTCCTCATCACCCAACTAAAA1115980.105075158001362No Hit
CTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTCACACCT1105020.10404321860128768No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGG1104000.10394718044544136No Hit
CGAAAATCTGTTCGCTTCATTCATTGCCCCCACAATCCTAGGCCTACCCG1099020.10347828827277986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)