FastQCFastQC Report
Tue 8 Aug 2023
EGAF00007958707

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958707
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117105348
Sequences flagged as poor quality0
Sequence length35-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9112100.7781113463750605No Hit
CGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGG3185630.2720311287576721No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA2352890.20092079825423514No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG1707620.1458191303099155No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG1706980.14576447866411704No Hit
CCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGCATCCCCG1699450.14512146789401967No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC1617040.13808421456550388No Hit
GGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCT1532160.13083604004148472No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC1356950.11587429807219393No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)