FastQCFastQC Report
Tue 8 Aug 2023
EGAF00007958723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89217133
Sequences flagged as poor quality0
Sequence length35-151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15091041.691495735465967No Hit
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC2419840.2712304149024829No Hit
ACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGACTCCT1858410.2083019188702242No Hit
CAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGACTC1681590.18848285564164005No Hit
CACAACTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGAC1214880.13617115447993605No Hit
CTGTGTTCACTAGCAACCTCAAACAGACACCATGGTGCACCTGACTCCTG1116770.12517438774904366No Hit
CCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGAC1035880.11610774356535308No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGGCCCCTAACAGGGGCC923770.10354177151153242No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)