FastQCFastQC Report
Tue 8 Aug 2023
EGAF00007958760

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958760
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71423049
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGGAAGTAGGTCTTGGTGGTGGGGAAGGACAGGAACATCCTCTCCAGG753770.1055359594071656No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN744720.10426886144275359No Hit
CCCAGGGTTTCTCCTCCAGCATCTTCCACATTCACCTTGCCCCACAGGCT729240.10210149387489743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)