FastQCFastQC Report
Tue 8 Aug 2023
EGAF00007958761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71423049
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAACGTCTGAGGTTATCAATAAGCTCCTAGTCCAGACGCCATGGGTCAT5171580.7240771813031952No Hit
CACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACC2676860.3747893764658521No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1600570.2240971258451876No Hit
CCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGAC1265410.17717109780625578No Hit
GTCTGAGGTTATCAATAAGCTCCTAGTCCAGACGCCATGGGTCATTTCAC1223070.1712430394843547No Hit
CTGAGGTTATCAATAAGCTCCTAGTCCAGACGCCATGGGTCATTTCACAG1117170.1564158931383621No Hit
GAACGTCTGAGGTTATCAATAAGCTCCTAGTCCAGACGCCATGGGTCATT864510.12104075814517523No Hit
CTGGAACGTCTGAGGTTATCAATAAGCTCCTAGTCCAGACGCCATGGGTC850530.11908340681451447No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)