FastQCFastQC Report
Wed 31 May 2023
EGAF00007958817

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958817
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences387167
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG33390.8624185429026752No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA19910.5142483734409182No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC15060.3889794326479271No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9930.2564784705308046No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT9530.24614701149633106No Hit
CTGGAACGTCCGGTGTACCCGAAACCGGTTC9100.23504069303427202No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8940.23090810942048265No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8750.22600066637910773No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8140.21024519135153563No Hit
GTGAGCGATGCCGTCGCTAACGGCCTGAAGG7540.1947480027998254No Hit
GAAGAGCTGTCCAACGAAGTTCTGCCACCGC7340.18958227328258864No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6870.17744280891708228No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6860.17718452244122046No Hit
TTCGTCGAACTGATGCAGCCGCTGAAACGTT6470.16711134988260878No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6130.15832960970330634No Hit
CGCCGTCCGCCACCTGGTCGTCGCCCGTTCT4900.12656037317230032No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC4690.12113635717920174No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC4460.11519576823437949No Hit
GGCGCCGAAACCGAAGAAGGTGGTGACGATC4240.10951346576541907No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG4180.10796374691024804No Hit

[OK]Adapter Content

Adapter graph