FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007958893

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958893
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences542462
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14840.27356754943203393No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9840.18139519450210337No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7110.13106908871036127No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6680.12314226618638725No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5970.1100537917863371No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5470.10083655629334405No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)