FastQCFastQC Report
Wed 31 May 2023
EGAF00007958911

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958911
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences532925
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27750.5207111694891401No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG16940.31786836796922646No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG14260.2675798658347797No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG11900.22329596097011775No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10230.19195946896842894No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)