FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007958969

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958969
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences473356
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24010.5072292312762487No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT9050.191188027615579No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6220.1314021582065084No Hit
CTGCAGGCGCCGAAAACTCGCTCCACCACCAAC5160.1090088643642417No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)