FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007958979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences503449
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24890.4943896998504317No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT18040.3583282517196379No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC10190.20240381846026112No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT9850.19565040351654286No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC9620.1910819169369688No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC8620.17121893180838574No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG8430.16744496463395497No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT8340.1656572959723825No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT8270.16426688701338168No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT8050.15989703028509344No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG7630.15155457653108856No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGGAA6630.13169159140250553No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATGTA6520.1295066630383614No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC6180.12275324809464315No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5840.11599983315092492No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAACAG5770.1146094241919241No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTACC5560.11043819731492167No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA5380.10686285999177672No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAGAA5250.10428067192506092No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAACTG5230.10388341222248927No Hit

[OK]Adapter Content

Adapter graph