FastQCFastQC Report
Sun 21 May 2023
EGAF00007958981

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958981
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences522034
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTATT18150.3476785036989928No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC10950.20975645264484688No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT10080.19309087147580425No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC9360.17929866637038966No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG8990.1722110054134405No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT8740.16742204530739377No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC8600.1647402276480076No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT8400.16090905956317023No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG8280.15861035871226778No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT8050.15420451541470478No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATGTA6850.1312175069056805No Hit
GAAGAGGCTCCGGCAGTTGATCCAGTGCAGGAA6620.1268116636081175No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAGAA6500.12451296275721505No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAACAG6350.121639586693587No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6090.11665906818329841No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6090.11665906818329841No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC6020.11531815935360533No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC5770.1105291992475586No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTACC5700.10918829041786551No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA5440.1042077719075769No Hit

[OK]Adapter Content

Adapter graph