FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007958983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences553166
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20110.36354367405082744No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19570.35378168578690666No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7540.1363062805740049No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6710.12130174305723779No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6340.11461297332084762No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5740.10376631969426899No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)