FastQCFastQC Report
Sun 21 May 2023
EGAF00007958985

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958985
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences525651
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG76401.4534358348029397No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19150.36431016016330225No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6940.1320267630043508No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6300.11985138428348847No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6060.11528561726316511No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5950.1131929740455169No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5360.10196879678722194No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5270.10025663415460069No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)