FastQCFastQC Report
Wed 31 May 2023
EGAF00007958987

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958987
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences538276
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28710.533369498175657No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23720.4406661266710758No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC20230.3758295001077514No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT18610.34573341557119397No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG11750.21828950203984573No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10980.2039845729700005No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8520.1582831112663392No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG7190.13357459741842476No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6510.12094167304505495No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6210.11536832405680357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)