FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007958991

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007958991
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences524947
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG77881.4835783421945454No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22530.4291861845100553No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC20030.3815623291494189No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17020.32422320729521265No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG11770.22421311103787622No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10720.20421109178640892No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8170.1556347593185598No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG7110.13544224464564994No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6240.11886914298014847No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5930.11296378491542956No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5320.10134356420743428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)